BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025F12SP1|AL428428
(893 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1770 0.0
>3x_Contig1555
Length = 10828
Score = 1770 bits (893), Expect = 0.0
Identities = 893/893 (100%)
Strand = Plus / Minus
Query: 1 gatcaaaggaatatgccgaaatcgcttcttcatgttagattttcttattgcagtagacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10150 gatcaaaggaatatgccgaaatcgcttcttcatgttagattttcttattgcagtagacca 10091
Query: 61 gaacacgtgacccgaatttttggacggatctcagttacttttcacgagatatccgggtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10090 gaacacgtgacccgaatttttggacggatctcagttacttttcacgagatatccgggtaa 10031
Query: 121 tatcacggtatttaaatctacttgtcaaacacccatcaaccacacatacataaattctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10030 tatcacggtatttaaatctacttgtcaaacacccatcaaccacacatacataaattctcc 9971
Query: 181 cggtcgcccctctggttcccccccactaccgatacagcactggcagaaattggaaaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9970 cggtcgcccctctggttcccccccactaccgatacagcactggcagaaattggaaaacca 9911
Query: 241 aagacgaaaacatgttcccggagctccaatgaacccacacatcacgatatatgaccccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9910 aagacgaaaacatgttcccggagctccaatgaacccacacatcacgatatatgaccccag 9851
Query: 301 attcatttaatttgaagatcaataaaacctttttttttattttccctctcagtgttatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9850 attcatttaatttgaagatcaataaaacctttttttttattttccctctcagtgttatga 9791
Query: 361 gcaaaatcaccttaaatcgctacagaaaacacataatcaaatagtacttgcaaatcatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9790 gcaaaatcaccttaaatcgctacagaaaacacataatcaaatagtacttgcaaatcatgt 9731
Query: 421 tctgtttcaagtgactaggaaatgccttagcacactacgtgccatactgcgtccatagcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9730 tctgtttcaagtgactaggaaatgccttagcacactacgtgccatactgcgtccatagcg 9671
Query: 481 agcttttctcattctgtttttcttttgtttccttcgcgccagaaatggtgcggttcttgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9670 agcttttctcattctgtttttcttttgtttccttcgcgccagaaatggtgcggttcttgc 9611
Query: 541 gatttttcaaagctagaagaaattcagagaccagataatcgatatcagacagagtaatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9610 gatttttcaaagctagaagaaattcagagaccagataatcgatatcagacagagtaatga 9551
Query: 601 actggcttcgttggtttcttcgggggtagaattttccgaattaatccgttgcgttgtccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9550 actggcttcgttggtttcttcgggggtagaattttccgaattaatccgttgcgttgtccg 9491
Query: 661 ctacttgcgtatggatgtaagtcgtgtatattgtctgtttgatccttattttagtgtata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9490 ctacttgcgtatggatgtaagtcgtgtatattgtctgtttgatccttattttagtgtata 9431
Query: 721 taaattggattcaaaccagttttatgatttcgatcctcttcagcactttatgacttatta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9430 taaattggattcaaaccagttttatgatttcgatcctcttcagcactttatgacttatta 9371
Query: 781 ttggattcgagcattagtttcaaattaaaggcataatcaagtagaaagaagactattcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9370 ttggattcgagcattagtttcaaattaaaggcataatcaagtagaaagaagactattcaa 9311
Query: 841 ttcatttcccttccgaagcttcgcatatcccgattaaataattaataaatggc 893
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9310 ttcatttcccttccgaagcttcgcatatcccgattaaataattaataaatggc 9258
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7885
Number of Sequences: 1807
Number of extensions: 7885
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 1
length of query: 893
length of database: 10,358,551
effective HSP length: 16
effective length of query: 877
effective length of database: 10,329,639
effective search space: 9059093403
effective search space used: 9059093403
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)